WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54E2A.1.1 Sequence Name  Y54E2A.1.1
Length (nt)  1953   Chromosome Location  II: 14734405-14739243
Chromosome . Primary Identifier  II Chromosome Location . Start  14734405
Chromosome Location . End  14739243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E2A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013187 npr-34 Y54E2A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E2A.1 Y54E2A.1 1842   II: 14734510-14734627

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E2A.1.1 14734405 14739243 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon76030   223   II: 14734405-14734627 Caenorhabditis elegans
Exon76031   96   II: 14735275-14735370 Caenorhabditis elegans
Exon76032   108   II: 14735414-14735521 Caenorhabditis elegans
Exon76033   242   II: 14735566-14735807 Caenorhabditis elegans
Exon76034   255   II: 14736074-14736328 Caenorhabditis elegans
Exon76035   160   II: 14737181-14737340 Caenorhabditis elegans
Exon76036   110   II: 14737391-14737500 Caenorhabditis elegans
Exon76037   244   II: 14737559-14737802 Caenorhabditis elegans
Exon76038   233   II: 14737850-14738082 Caenorhabditis elegans
Exon76039   135   II: 14738128-14738262 Caenorhabditis elegans
Exon76040   147   II: 14739097-14739243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54E2A.1.1 14734405 14739243 -1

1 Sequence

Length
1953

1 Sequence Ontology Term

Identifier Name Description
transcript