WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C38C6.2b.1 Sequence Name  C38C6.2b.1
Length (nt)  1812   Chromosome Location  II: 14640375-14643659
Chromosome . Primary Identifier  II Chromosome Location . Start  14640375
Chromosome Location . End  14643659 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C38C6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000225 atgp-2 C38C6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C38C6.2b C38C6.2b 1812   II: 14640375-14640491

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C38C6.2b.1 14640375 14643659 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon75486   117   II: 14640375-14640491 Caenorhabditis elegans
Exon75488   90   II: 14640629-14640718 Caenorhabditis elegans
Exon75492   435   II: 14640774-14641208 Caenorhabditis elegans
Exon75496   107   II: 14641898-14642004 Caenorhabditis elegans
Exon75498   113   II: 14642053-14642165 Caenorhabditis elegans
Exon75500   244   II: 14642210-14642453 Caenorhabditis elegans
Exon75502   186   II: 14642501-14642686 Caenorhabditis elegans
Exon75504   362   II: 14642733-14643094 Caenorhabditis elegans
Exon75505   158   II: 14643502-14643659 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C38C6.2b.1 14640375 14643659 -1

1 Sequence

Length
1812

1 Sequence Ontology Term

Identifier Name Description
transcript