WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.6a.2 Sequence Name  Y48B6A.6a.2
Length (nt)  2447   Chromosome Location  II: 14178814-14189880
Chromosome . Primary Identifier  II Chromosome Location . Start  14178814
Chromosome Location . End  14189880 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.6a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012980 efhd-1 Y48B6A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.6a Y48B6A.6a 2064   II: 14180265-14180378

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48B6A.6a.2 14178814 14189880 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74390   147   II: 14178814-14178960 Caenorhabditis elegans
Exon74391   120   II: 14180259-14180378 Caenorhabditis elegans
Exon74394   474   II: 14181152-14181625 Caenorhabditis elegans
Exon74396   722   II: 14182896-14183617 Caenorhabditis elegans
Exon74398   70   II: 14183965-14184034 Caenorhabditis elegans
Exon74400   172   II: 14184107-14184278 Caenorhabditis elegans
Exon74404   212   II: 14187862-14188073 Caenorhabditis elegans
Exon74408   168   II: 14188126-14188293 Caenorhabditis elegans
Exon74414   362   II: 14189519-14189880 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48B6A.6a.2 14178814 14189880 1

1 Sequence

Length
2447

1 Sequence Ontology Term

Identifier Name Description
transcript