WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09E4.2a.1 Sequence Name  K09E4.2a.1
Length (nt)  2125   Chromosome Location  II: 14127641-14132833
Chromosome . Primary Identifier  II Chromosome Location . Start  14127641
Chromosome Location . End  14132833 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09E4.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010720 algn-3 K09E4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09E4.2a K09E4.2a 1905   II: 14127851-14128141

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K09E4.2a.1 14127641 14132833 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74317   501   II: 14127641-14128141 Caenorhabditis elegans
Exon74319   108   II: 14128304-14128411 Caenorhabditis elegans
Exon74321   637   II: 14129119-14129755 Caenorhabditis elegans
Exon74324   86   II: 14130470-14130555 Caenorhabditis elegans
Exon74326   130   II: 14130620-14130749 Caenorhabditis elegans
Exon74329   111   II: 14131202-14131312 Caenorhabditis elegans
Exon74332   412   II: 14131360-14131771 Caenorhabditis elegans
Exon74333   140   II: 14132694-14132833 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K09E4.2a.1 14127641 14132833 -1

1 Sequence

Length
2125

1 Sequence Ontology Term

Identifier Name Description
transcript