WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G8C.4.1 Sequence Name  Y39G8C.4.1
Length (nt)  1871   Chromosome Location  II: 14089851-14094690
Chromosome . Primary Identifier  II Chromosome Location . Start  14089851
Chromosome Location . End  14094690 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G8C.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000662 col-87 Y39G8C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G8C.4 Y39G8C.4 1647   II: 14090075-14090518

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39G8C.4.1 14089851 14094690 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74263   668   II: 14089851-14090518 Caenorhabditis elegans
Exon74264   533   II: 14091144-14091676 Caenorhabditis elegans
Exon74265   232   II: 14093032-14093263 Caenorhabditis elegans
Exon74266   228   II: 14093323-14093550 Caenorhabditis elegans
Exon74267   69   II: 14094363-14094431 Caenorhabditis elegans
Exon74268   141   II: 14094550-14094690 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39G8C.4.1 14089851 14094690 -1

1 Sequence

Length
1871

1 Sequence Ontology Term

Identifier Name Description
transcript