WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G8C.1.1 Sequence Name  Y39G8C.1.1
Length (nt)  5851   Chromosome Location  II: 14068907-14089877
Chromosome . Primary Identifier  II Chromosome Location . Start  14068907
Chromosome Location . End  14089877 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G8C.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012730 xrn-1 Y39G8C.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G8C.1 Y39G8C.1 4776   II: 14068997-14069203

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8C.1.1 14068907 14089877 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74243   297   II: 14068907-14069203 Caenorhabditis elegans
Exon74244   101   II: 14070137-14070237 Caenorhabditis elegans
Exon74245   208   II: 14070655-14070862 Caenorhabditis elegans
Exon74246   309   II: 14072899-14073207 Caenorhabditis elegans
Exon74247   507   II: 14074680-14075186 Caenorhabditis elegans
Exon74255   906   II: 14077579-14078484 Caenorhabditis elegans
Exon74256   432   II: 14079788-14080219 Caenorhabditis elegans
Exon74258   154   II: 14081005-14081158 Caenorhabditis elegans
Exon74259   758   II: 14082694-14083451 Caenorhabditis elegans
Exon74260   189   II: 14085306-14085494 Caenorhabditis elegans
Exon74261   710   II: 14086653-14087362 Caenorhabditis elegans
Exon74262   1280   II: 14088598-14089877 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G8C.1.1 14068907 14089877 1

1 Sequence

Length
5851

1 Sequence Ontology Term

Identifier Name Description
transcript