WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y51H1A.2a.1 Sequence Name  Y51H1A.2a.1
Length (nt)  3062   Chromosome Location  II: 13855788-13872241
Chromosome . Primary Identifier  II Chromosome Location . Start  13855788
Chromosome Location . End  13872241 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51H1A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013093 cup-14 Y51H1A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H1A.2a Y51H1A.2a 2868   II: 13855982-13856125

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y51H1A.2a.1 13855788 13872241 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73932   338   II: 13855788-13856125 Caenorhabditis elegans
Exon73935   526   II: 13856828-13857353 Caenorhabditis elegans
Exon73941   386   II: 13858281-13858666 Caenorhabditis elegans
Exon73945   78   II: 13858721-13858798 Caenorhabditis elegans
Exon73951   131   II: 13862720-13862850 Caenorhabditis elegans
Exon73953   361   II: 13863730-13864090 Caenorhabditis elegans
Exon73955   440   II: 13865945-13866384 Caenorhabditis elegans
Exon73957   350   II: 13868082-13868431 Caenorhabditis elegans
Exon73959   176   II: 13869849-13870024 Caenorhabditis elegans
Exon73961   106   II: 13871299-13871404 Caenorhabditis elegans
Exon73964   152   II: 13871762-13871913 Caenorhabditis elegans
Exon73965   18   II: 13872224-13872241 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y51H1A.2a.1 13855788 13872241 -1

1 Sequence

Length
3062

1 Sequence Ontology Term

Identifier Name Description
transcript