WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G9A.3c.1 Sequence Name  Y54G9A.3c.1
Length (nt)  1955   Chromosome Location  II: 13707525-13712887
Chromosome . Primary Identifier  II Chromosome Location . Start  13707525
Chromosome Location . End  13712887 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G9A.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002235 kqt-3 Y54G9A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G9A.3c Y54G9A.3c 1743   II: 13708453-13708668

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G9A.3c.1 13707525 13712887 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73742   70   II: 13707525-13707594 Caenorhabditis elegans
Exon73746   216   II: 13708453-13708668 Caenorhabditis elegans
Exon73750   127   II: 13709024-13709150 Caenorhabditis elegans
Exon73754   139   II: 13709198-13709336 Caenorhabditis elegans
Exon73758   555   II: 13709721-13710275 Caenorhabditis elegans
Exon73762   390   II: 13711266-13711655 Caenorhabditis elegans
Exon73766   103   II: 13711739-13711841 Caenorhabditis elegans
Exon73768   355   II: 13712533-13712887 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y54G9A.3c.1 13707525 13712887 1

1 Sequence

Length
1955

1 Sequence Ontology Term

Identifier Name Description
transcript