WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48E1A.1a.1 Sequence Name  Y48E1A.1a.1
Length (nt)  5409   Chromosome Location  II: 13670626-13694795
Chromosome . Primary Identifier  II Chromosome Location . Start  13670626
Chromosome Location . End  13694795 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012999 rpoa-1 Y48E1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48E1A.1a Y48E1A.1a 5214   II: 13670807-13670973

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48E1A.1a.1 13670626 13694795 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73725   348   II: 13670626-13670973 Caenorhabditis elegans
Exon73727   193   II: 13676951-13677143 Caenorhabditis elegans
Exon73730   229   II: 13682397-13682625 Caenorhabditis elegans
Exon73731   633   II: 13685482-13686114 Caenorhabditis elegans
Exon73732   322   II: 13687923-13688244 Caenorhabditis elegans
Exon73733   1195   II: 13689413-13690607 Caenorhabditis elegans
Exon73734   2172   II: 13692185-13694356 Caenorhabditis elegans
Exon73735   171   II: 13694421-13694591 Caenorhabditis elegans
Exon73736   146   II: 13694650-13694795 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48E1A.1a.1 13670626 13694795 -1

1 Sequence

Length
5409

1 Sequence Ontology Term

Identifier Name Description
transcript