WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48E1B.3c.1 Sequence Name  Y48E1B.3c.1
Length (nt)  2469   Chromosome Location  II: 13555126-13567971
Chromosome . Primary Identifier  II Chromosome Location . Start  13555126
Chromosome Location . End  13567971 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013002 Y48E1B.3 Y48E1B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48E1B.3c Y48E1B.3c 1929   II: 13555252-13555486

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48E1B.3c.1 13555126 13567971 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73556   361   II: 13555126-13555486 Caenorhabditis elegans
Exon73558   455   II: 13557547-13558001 Caenorhabditis elegans
Exon73561   807   II: 13560399-13561205 Caenorhabditis elegans
Exon73562   192   II: 13562654-13562845 Caenorhabditis elegans
Exon73563   64   II: 13562907-13562970 Caenorhabditis elegans
Exon73564   424   II: 13564364-13564787 Caenorhabditis elegans
Exon73567   112   II: 13567752-13567863 Caenorhabditis elegans
Exon73569   54   II: 13567918-13567971 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48E1B.3c.1 13555126 13567971 -1

1 Sequence

Length
2469

1 Sequence Ontology Term

Identifier Name Description
transcript