WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54F11.2a Sequence Name  F54F11.2a
Length (nt)  4770   Chromosome Location  II: 13507831-13507875
Chromosome . Primary Identifier  II Chromosome Location . Start  13507831
Chromosome Location . End  13507875
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54F11.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11095 NEP-17, isoform a 178.0 1589 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00001758
WBRNAi00048358
WBRNAi00015644
WBRNAi00089087

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F54F11.2a 13507831 13507875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010070 nep-17 F54F11.2 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F54F11.2a 13507831 13507875 1
CDS:F54F11.2a 13508560 13508740 1
CDS:F54F11.2a 13508881 13508968 1
CDS:F54F11.2a 13509119 13509272 1
CDS:F54F11.2a 13509479 13509867 1
CDS:F54F11.2a 13509918 13510142 1
CDS:F54F11.2a 13510386 13510620 1
CDS:F54F11.2a 13510677 13511401 1
CDS:F54F11.2a 13511761 13512236 1
CDS:F54F11.2a 13512284 13512396 1
CDS:F54F11.2a 13513260 13514532 1
CDS:F54F11.2a 13514980 13515522 1
CDS:F54F11.2a 13516000 13516223 1
CDS:F54F11.2a 13516271 13516369 1

1 Sequence

Length
4770

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54F11.2a.1 F54F11.2a.1 4891   II: 13507819-13516478