WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48C3A.17d.1 Sequence Name  Y48C3A.17d.1
Length (nt)  1712   Chromosome Location  II: 13406140-13411895
Chromosome . Primary Identifier  II Chromosome Location . Start  13406140
Chromosome Location . End  13411895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.17d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001162 efl-2 Y48C3A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48C3A.17d Y48C3A.17d 1077   II: 13406160-13406452

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48C3A.17d.1 13406140 13411895 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73323   313   II: 13406140-13406452 Caenorhabditis elegans
Exon73326   150   II: 13408013-13408162 Caenorhabditis elegans
Exon73328   94   II: 13409023-13409116 Caenorhabditis elegans
Exon73329   283   II: 13409310-13409592 Caenorhabditis elegans
Exon73331   872   II: 13411024-13411895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48C3A.17d.1 13406140 13411895 1

1 Sequence

Length
1712

1 Sequence Ontology Term

Identifier Name Description
transcript