WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48C3A.12a.1 Sequence Name  Y48C3A.12a.1
Length (nt)  2101   Chromosome Location  II: 13376412-13388762
Chromosome . Primary Identifier  II Chromosome Location . Start  13376412
Chromosome Location . End  13388762 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012994 tsct-2 Y48C3A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48C3A.12a Y48C3A.12a 2028   II: 13376423-13376514

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48C3A.12a.1 13376412 13388762 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73265   103   II: 13376412-13376514 Caenorhabditis elegans
Exon73271   96   II: 13377449-13377544 Caenorhabditis elegans
Exon73273   367   II: 13379127-13379493 Caenorhabditis elegans
Exon73277   303   II: 13380540-13380842 Caenorhabditis elegans
Exon73281   195   II: 13382486-13382680 Caenorhabditis elegans
Exon73285   495   II: 13383175-13383669 Caenorhabditis elegans
Exon73289   258   II: 13387308-13387565 Caenorhabditis elegans
Exon73296   284   II: 13388479-13388762 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48C3A.12a.1 13376412 13388762 1

1 Sequence

Length
2101

1 Sequence Ontology Term

Identifier Name Description
transcript