WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48C3A.5a.1 Sequence Name  Y48C3A.5a.1
Length (nt)  1898   Chromosome Location  II: 13272634-13304224
Chromosome . Primary Identifier  II Chromosome Location . Start  13272634
Chromosome Location . End  13304224 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012989 Y48C3A.5 Y48C3A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48C3A.5a Y48C3A.5a 1764   II: 13272634-13272774

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48C3A.5a.1 13272634 13304224 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73163   141   II: 13272634-13272774 Caenorhabditis elegans
Exon73164   125   II: 13278175-13278299 Caenorhabditis elegans
Exon73167   230   II: 13279046-13279275 Caenorhabditis elegans
Exon73170   143   II: 13279626-13279768 Caenorhabditis elegans
Exon73186   99   II: 13299696-13299794 Caenorhabditis elegans
Exon73189   587   II: 13300511-13301097 Caenorhabditis elegans
Exon73195   125   II: 13302234-13302358 Caenorhabditis elegans
Exon73199   94   II: 13302702-13302795 Caenorhabditis elegans
Exon73203   114   II: 13303170-13303283 Caenorhabditis elegans
Exon73210   240   II: 13303985-13304224 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48C3A.5a.1 13272634 13304224 1

1 Sequence

Length
1898

1 Sequence Ontology Term

Identifier Name Description
transcript