WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F1A.6.6 Sequence Name  Y38F1A.6.6
Length (nt)  1610   Chromosome Location  II: 12994354-12996344
Chromosome . Primary Identifier  II Chromosome Location . Start  12994354
Chromosome Location . End  12996344 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.6.6

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012608 hphd-1 Y38F1A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F1A.6 Y38F1A.6 1398   II: 12994467-12994579

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F1A.6.6 12994354 12996344 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72628   226   II: 12994354-12994579 Caenorhabditis elegans
Exon72639   118   II: 12994629-12994746 Caenorhabditis elegans
Exon72646   312   II: 12994797-12995108 Caenorhabditis elegans
Exon72653   592   II: 12995160-12995751 Caenorhabditis elegans
Exon72660   83   II: 12995806-12995888 Caenorhabditis elegans
Exon72667   68   II: 12995938-12996005 Caenorhabditis elegans
Exon72670   114   II: 12996081-12996194 Caenorhabditis elegans
Exon72678   97   II: 12996248-12996344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F1A.6.6 12994354 12996344 -1

1 Sequence

Length
1610

1 Sequence Ontology Term

Identifier Name Description
transcript