WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F1A.4.1 Sequence Name  Y38F1A.4.1
Length (nt)  1165   Chromosome Location  II: 12966816-12969722
Chromosome . Primary Identifier  II Chromosome Location . Start  12966816
Chromosome Location . End  12969722 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012607 Y38F1A.4 Y38F1A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F1A.4 Y38F1A.4 1029   II: 12966872-12967146

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F1A.4.1 12966816 12969722 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72599   331   II: 12966816-12967146 Caenorhabditis elegans
Exon72600   100   II: 12967617-12967716 Caenorhabditis elegans
Exon72601   135   II: 12967772-12967906 Caenorhabditis elegans
Exon72602   121   II: 12967958-12968078 Caenorhabditis elegans
Exon72603   142   II: 12968399-12968540 Caenorhabditis elegans
Exon72604   260   II: 12968960-12969219 Caenorhabditis elegans
Exon72605   76   II: 12969647-12969722 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F1A.4.1 12966816 12969722 -1

1 Sequence

Length
1165

1 Sequence Ontology Term

Identifier Name Description
transcript