WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F1A.3.1 Sequence Name  Y38F1A.3.1
Length (nt)  2977   Chromosome Location  II: 12965546-12978160
Chromosome . Primary Identifier  II Chromosome Location . Start  12965546
Chromosome Location . End  12978160 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004232 ptr-18 Y38F1A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F1A.3 Y38F1A.3 2688   II: 12965568-12965689

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38F1A.3.1 12965546 12978160 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72596   144   II: 12965546-12965689 Caenorhabditis elegans
Exon72597   75   II: 12966557-12966631 Caenorhabditis elegans
Exon72598   126   II: 12966682-12966807 Caenorhabditis elegans
Exon72606   261   II: 12970734-12970994 Caenorhabditis elegans
Exon72607   97   II: 12971109-12971205 Caenorhabditis elegans
Exon72608   264   II: 12972095-12972358 Caenorhabditis elegans
Exon72609   110   II: 12972866-12972975 Caenorhabditis elegans
Exon72610   792   II: 12973795-12974586 Caenorhabditis elegans
Exon72611   364   II: 12976611-12976974 Caenorhabditis elegans
Exon72612   204   II: 12977026-12977229 Caenorhabditis elegans
Exon72613   540   II: 12977621-12978160 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38F1A.3.1 12965546 12978160 1

1 Sequence

Length
2977

1 Sequence Ontology Term

Identifier Name Description
transcript