WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38F1A.1.1 Sequence Name  Y38F1A.1.1
Length (nt)  931   Chromosome Location  II: 12952490-12954770
Chromosome . Primary Identifier  II Chromosome Location . Start  12952490
Chromosome Location . End  12954770 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012605 Y38F1A.1 Y38F1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38F1A.1 Y38F1A.1 810   II: 12952554-12952673

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F1A.1.1 12952490 12954770 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72581   184   II: 12952490-12952673 Caenorhabditis elegans
Exon72582   216   II: 12952723-12952938 Caenorhabditis elegans
Exon72583   163   II: 12952989-12953151 Caenorhabditis elegans
Exon72584   116   II: 12953206-12953321 Caenorhabditis elegans
Exon72585   114   II: 12953374-12953487 Caenorhabditis elegans
Exon72587   138   II: 12954633-12954770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38F1A.1.1 12952490 12954770 -1

1 Sequence

Length
931

1 Sequence Ontology Term

Identifier Name Description
transcript