WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.30.1 Sequence Name  Y46G5A.30.1
Length (nt)  2348   Chromosome Location  II: 12861963-12865785
Chromosome . Primary Identifier  II Chromosome Location . Start  12861963
Chromosome Location . End  12865785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.30.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004904 snf-5 Y46G5A.30 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.30 Y46G5A.30 2187   II: 12862014-12862049

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.30.1 12861963 12865785 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72405   87   II: 12861963-12862049 Caenorhabditis elegans
Exon72406   204   II: 12862098-12862301 Caenorhabditis elegans
Exon72407   165   II: 12862347-12862511 Caenorhabditis elegans
Exon72408   231   II: 12862579-12862809 Caenorhabditis elegans
Exon72409   536   II: 12862855-12863390 Caenorhabditis elegans
Exon72410   359   II: 12863436-12863794 Caenorhabditis elegans
Exon72411   622   II: 12864344-12864965 Caenorhabditis elegans
Exon72412   144   II: 12865642-12865785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.30.1 12861963 12865785 -1

1 Sequence

Length
2348

1 Sequence Ontology Term

Identifier Name Description
transcript