WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.29.1 Sequence Name  Y46G5A.29.1
Length (nt)  2503   Chromosome Location  II: 12856200-12862058
Chromosome . Primary Identifier  II Chromosome Location . Start  12856200
Chromosome Location . End  12862058 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.29.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012917 Y46G5A.29 Y46G5A.29 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.29 Y46G5A.29 2271   II: 12856220-12856338

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.29.1 12856200 12862058 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72392   139   II: 12856200-12856338 Caenorhabditis elegans
Exon72394   128   II: 12857040-12857167 Caenorhabditis elegans
Exon72395   129   II: 12857220-12857348 Caenorhabditis elegans
Exon72396   127   II: 12857394-12857520 Caenorhabditis elegans
Exon72397   412   II: 12857592-12858003 Caenorhabditis elegans
Exon72398   187   II: 12858376-12858562 Caenorhabditis elegans
Exon72399   225   II: 12858618-12858842 Caenorhabditis elegans
Exon72400   111   II: 12858897-12859007 Caenorhabditis elegans
Exon72401   111   II: 12859306-12859416 Caenorhabditis elegans
Exon72402   141   II: 12859460-12859600 Caenorhabditis elegans
Exon72403   196   II: 12859643-12859838 Caenorhabditis elegans
Exon72404   597   II: 12861462-12862058 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.29.1 12856200 12862058 1

1 Sequence

Length
2503

1 Sequence Ontology Term

Identifier Name Description
transcript