WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.17.1 Sequence Name  Y46G5A.17.1
Length (nt)  2796   Chromosome Location  II: 12788252-12796452
Chromosome . Primary Identifier  II Chromosome Location . Start  12788252
Chromosome Location . End  12796452 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.17.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012907 cpt-1 Y46G5A.17 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.17 Y46G5A.17 2340   II: 12788596-12788688

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.17.1 12788252 12796452 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72278   437   II: 12788252-12788688 Caenorhabditis elegans
Exon72279   507   II: 12789371-12789877 Caenorhabditis elegans
Exon72281   679   II: 12790864-12791542 Caenorhabditis elegans
Exon72283   503   II: 12793634-12794136 Caenorhabditis elegans
Exon72285   268   II: 12795184-12795451 Caenorhabditis elegans
Exon72287   250   II: 12795997-12796246 Caenorhabditis elegans
Exon72289   152   II: 12796301-12796452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.17.1 12788252 12796452 -1

1 Sequence

Length
2796

1 Sequence Ontology Term

Identifier Name Description
transcript