WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.4.1 Sequence Name  Y46G5A.4.1
Length (nt)  6817   Chromosome Location  II: 12726963-12736910
Chromosome . Primary Identifier  II Chromosome Location . Start  12726963
Chromosome Location . End  12736910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012896 snrp-200 Y46G5A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.4 Y46G5A.4 6438   II: 12727307-12727496

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.4.1 12726963 12736910 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72177   534   II: 12726963-12727496 Caenorhabditis elegans
Exon72178   763   II: 12727623-12728385 Caenorhabditis elegans
Exon72179   229   II: 12728441-12728669 Caenorhabditis elegans
Exon72182   161   II: 12729470-12729630 Caenorhabditis elegans
Exon72183   411   II: 12729831-12730241 Caenorhabditis elegans
Exon72184   310   II: 12730650-12730959 Caenorhabditis elegans
Exon72185   390   II: 12732102-12732491 Caenorhabditis elegans
Exon72186   1176   II: 12732605-12733780 Caenorhabditis elegans
Exon72187   408   II: 12733843-12734250 Caenorhabditis elegans
Exon72188   1138   II: 12734309-12735446 Caenorhabditis elegans
Exon72189   823   II: 12735565-12736387 Caenorhabditis elegans
Exon72190   474   II: 12736437-12736910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.4.1 12726963 12736910 -1

1 Sequence

Length
6817

1 Sequence Ontology Term

Identifier Name Description
transcript