WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.1c.1 Sequence Name  Y46G5A.1c.1
Length (nt)  2790   Chromosome Location  II: 12715671-12725566
Chromosome . Primary Identifier  II Chromosome Location . Start  12715671
Chromosome Location . End  12725566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012894 tbc-17 Y46G5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.1c Y46G5A.1c 2334   II: 12715706-12716228

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.1c.1 12715671 12725566 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72149   558   II: 12715671-12716228 Caenorhabditis elegans
Exon72152   172   II: 12716760-12716931 Caenorhabditis elegans
Exon72155   351   II: 12716992-12717342 Caenorhabditis elegans
Exon72158   428   II: 12717825-12718252 Caenorhabditis elegans
Exon72161   125   II: 12718769-12718893 Caenorhabditis elegans
Exon72164   148   II: 12719964-12720111 Caenorhabditis elegans
Exon72167   167   II: 12721100-12721266 Caenorhabditis elegans
Exon72170   167   II: 12721816-12721982 Caenorhabditis elegans
Exon72173   140   II: 12723583-12723722 Caenorhabditis elegans
Exon72176   534   II: 12725033-12725566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y46G5A.1c.1 12715671 12725566 1

1 Sequence

Length
2790

1 Sequence Ontology Term

Identifier Name Description
transcript