WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y46G5A.1b.1 Sequence Name  Y46G5A.1b.1
Length (nt)  3490   Chromosome Location  II: 12694453-12725480
Chromosome . Primary Identifier  II Chromosome Location . Start  12694453
Chromosome Location . End  12725480 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012894 tbc-17 Y46G5A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.1b Y46G5A.1b 3030   II: 12694453-12694538

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.1b.1 12694453 12725480 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon72129   86   II: 12694453-12694538 Caenorhabditis elegans
Exon72131   181   II: 12694765-12694945 Caenorhabditis elegans
Exon72134   320   II: 12696129-12696448 Caenorhabditis elegans
Exon72137   284   II: 12697088-12697371 Caenorhabditis elegans
Exon72140   289   II: 12698776-12699064 Caenorhabditis elegans
Exon72143   181   II: 12700617-12700797 Caenorhabditis elegans
Exon72146   70   II: 12701656-12701725 Caenorhabditis elegans
Exon72151   172   II: 12716760-12716931 Caenorhabditis elegans
Exon72154   351   II: 12716992-12717342 Caenorhabditis elegans
Exon72157   428   II: 12717825-12718252 Caenorhabditis elegans
Exon72160   125   II: 12718769-12718893 Caenorhabditis elegans
Exon72163   148   II: 12719964-12720111 Caenorhabditis elegans
Exon72166   167   II: 12721100-12721266 Caenorhabditis elegans
Exon72168   100   II: 12721816-12721915 Caenorhabditis elegans
Exon72172   140   II: 12723583-12723722 Caenorhabditis elegans
Exon72174   448   II: 12725033-12725480 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y46G5A.1b.1 12694453 12725480 1

1 Sequence

Length
3490

1 Sequence Ontology Term

Identifier Name Description
transcript