WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38E10A.6a.1 Sequence Name  Y38E10A.6a.1
Length (nt)  4229   Chromosome Location  II: 12582179-12603680
Chromosome . Primary Identifier  II Chromosome Location . Start  12582179
Chromosome Location . End  12603680 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38E10A.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012584 ceh-100 Y38E10A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38E10A.6a Y38E10A.6a 4032   II: 12582376-12582459

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.6a.1 12582179 12603680 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71980   281   II: 12582179-12582459 Caenorhabditis elegans
Exon71981   75   II: 12583454-12583528 Caenorhabditis elegans
Exon71983   531   II: 12584502-12585032 Caenorhabditis elegans
Exon71985   174   II: 12586213-12586386 Caenorhabditis elegans
Exon71987   762   II: 12587239-12588000 Caenorhabditis elegans
Exon71989   174   II: 12589036-12589209 Caenorhabditis elegans
Exon71991   324   II: 12590573-12590896 Caenorhabditis elegans
Exon71993   174   II: 12591890-12592063 Caenorhabditis elegans
Exon71995   162   II: 12593010-12593171 Caenorhabditis elegans
Exon71997   120   II: 12593320-12593439 Caenorhabditis elegans
Exon71999   135   II: 12594251-12594385 Caenorhabditis elegans
Exon72001   174   II: 12595077-12595250 Caenorhabditis elegans
Exon72003   171   II: 12596133-12596303 Caenorhabditis elegans
Exon72005   120   II: 12596451-12596570 Caenorhabditis elegans
Exon72007   240   II: 12598091-12598330 Caenorhabditis elegans
Exon72009   174   II: 12600791-12600964 Caenorhabditis elegans
Exon72011   186   II: 12602099-12602284 Caenorhabditis elegans
Exon72013   252   II: 12603429-12603680 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38E10A.6a.1 12582179 12603680 -1

1 Sequence

Length
4229

1 Sequence Ontology Term

Identifier Name Description
transcript