WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C5.3.1 Sequence Name  F49C5.3.1
Length (nt)  1748   Chromosome Location  II: 12536503-12538691
Chromosome . Primary Identifier  II Chromosome Location . Start  12536503
Chromosome Location . End  12538691 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009866 F49C5.3 F49C5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C5.3 F49C5.3 1656   II: 12536503-12536532

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49C5.3.1 12536503 12538691 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71874   30   II: 12536503-12536532 Caenorhabditis elegans
Exon71875   640   II: 12536579-12537218 Caenorhabditis elegans
Exon71876   101   II: 12537271-12537371 Caenorhabditis elegans
Exon71877   114   II: 12537425-12537538 Caenorhabditis elegans
Exon71878   252   II: 12537582-12537833 Caenorhabditis elegans
Exon71879   112   II: 12537878-12537989 Caenorhabditis elegans
Exon71880   73   II: 12538041-12538113 Caenorhabditis elegans
Exon71881   105   II: 12538169-12538273 Caenorhabditis elegans
Exon71882   159   II: 12538321-12538479 Caenorhabditis elegans
Exon71883   162   II: 12538530-12538691 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49C5.3.1 12536503 12538691 1

1 Sequence

Length
1748

1 Sequence Ontology Term

Identifier Name Description
transcript