WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49C5.4.1 Sequence Name  F49C5.4.1
Length (nt)  1519   Chromosome Location  II: 12535753-12542415
Chromosome . Primary Identifier  II Chromosome Location . Start  12535753
Chromosome Location . End  12542415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49C5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009867 nimk-1 F49C5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49C5.4 F49C5.4 1512   II: 12535760-12535876

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49C5.4.1 12535753 12542415 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71873   124   II: 12535753-12535876 Caenorhabditis elegans
Exon71886   126   II: 12539728-12539853 Caenorhabditis elegans
Exon71887   138   II: 12540000-12540137 Caenorhabditis elegans
Exon71888   100   II: 12540186-12540285 Caenorhabditis elegans
Exon71889   269   II: 12540627-12540895 Caenorhabditis elegans
Exon71890   167   II: 12541049-12541215 Caenorhabditis elegans
Exon71891   337   II: 12541307-12541643 Caenorhabditis elegans
Exon71896   135   II: 12542108-12542242 Caenorhabditis elegans
Exon71897   123   II: 12542293-12542415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49C5.4.1 12535753 12542415 1

1 Sequence

Length
1519

1 Sequence Ontology Term

Identifier Name Description
transcript