WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50E10.4a.1 Sequence Name  C50E10.4a.1
Length (nt)  2593   Chromosome Location  II: 12339944-12344793
Chromosome . Primary Identifier  II Chromosome Location . Start  12339944
Chromosome Location . End  12344793 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50E10.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004945 sop-2 C50E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50E10.4a C50E10.4a 2208   II: 12339946-12340035

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50E10.4a.1 12339944 12344793 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71470   92   II: 12339944-12340035 Caenorhabditis elegans
Exon71472   67   II: 12340372-12340438 Caenorhabditis elegans
Exon71474   496   II: 12340656-12341151 Caenorhabditis elegans
Exon71476   346   II: 12341923-12342268 Caenorhabditis elegans
Exon71481   870   II: 12342636-12343505 Caenorhabditis elegans
Exon71482   63   II: 12343557-12343619 Caenorhabditis elegans
Exon71487   659   II: 12344135-12344793 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50E10.4a.1 12339944 12344793 1

1 Sequence

Length
2593

1 Sequence Ontology Term

Identifier Name Description
transcript