WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.18c.1 Sequence Name  Y57A10A.18c.1
Length (nt)  4987   Chromosome Location  II: 12209159-12221633
Chromosome . Primary Identifier  II Chromosome Location . Start  12209159
Chromosome Location . End  12221633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.18c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004167 pqn-87 Y57A10A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.18c Y57A10A.18c 4458   II: 12209688-12209830

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.18c.1 12209159 12221633 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71222   672   II: 12209159-12209830 Caenorhabditis elegans
Exon71228   370   II: 12210813-12211182 Caenorhabditis elegans
Exon71232   589   II: 12211790-12212378 Caenorhabditis elegans
Exon71239   1565   II: 12213392-12214956 Caenorhabditis elegans
Exon71245   120   II: 12215656-12215775 Caenorhabditis elegans
Exon71251   302   II: 12215890-12216191 Caenorhabditis elegans
Exon71256   50   II: 12217143-12217192 Caenorhabditis elegans
Exon71262   470   II: 12217253-12217722 Caenorhabditis elegans
Exon71268   139   II: 12218710-12218848 Caenorhabditis elegans
Exon71274   275   II: 12219391-12219665 Caenorhabditis elegans
Exon71280   186   II: 12219858-12220043 Caenorhabditis elegans
Exon71286   95   II: 12220295-12220389 Caenorhabditis elegans
Exon71292   113   II: 12220530-12220642 Caenorhabditis elegans
Exon71295   41   II: 12221593-12221633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.18c.1 12209159 12221633 -1

1 Sequence

Length
4987

1 Sequence Ontology Term

Identifier Name Description
transcript