WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y57A10A.18e.1 Sequence Name  Y57A10A.18e.1
Length (nt)  5197   Chromosome Location  II: 12209098-12221788
Chromosome . Primary Identifier  II Chromosome Location . Start  12209098
Chromosome Location . End  12221788 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y57A10A.18e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004167 pqn-87 Y57A10A.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y57A10A.18e Y57A10A.18e 4452   II: 12209688-12209830

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.18e.1 12209098 12221788 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71220   733   II: 12209098-12209830 Caenorhabditis elegans
Exon71227   361   II: 12210813-12211173 Caenorhabditis elegans
Exon71234   589   II: 12211790-12212378 Caenorhabditis elegans
Exon71240   1577   II: 12213392-12214968 Caenorhabditis elegans
Exon71244   111   II: 12215656-12215766 Caenorhabditis elegans
Exon71252   302   II: 12215890-12216191 Caenorhabditis elegans
Exon71258   50   II: 12217143-12217192 Caenorhabditis elegans
Exon71264   470   II: 12217253-12217722 Caenorhabditis elegans
Exon71270   139   II: 12218710-12218848 Caenorhabditis elegans
Exon71276   275   II: 12219391-12219665 Caenorhabditis elegans
Exon71282   186   II: 12219858-12220043 Caenorhabditis elegans
Exon71288   95   II: 12220295-12220389 Caenorhabditis elegans
Exon71294   113   II: 12220530-12220642 Caenorhabditis elegans
Exon71296   196   II: 12221593-12221788 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y57A10A.18e.1 12209098 12221788 -1

1 Sequence

Length
5197

1 Sequence Ontology Term

Identifier Name Description
transcript