WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K12D12.2.1 Sequence Name  K12D12.2.1
Length (nt)  5443   Chromosome Location  II: 11865431-11874788
Chromosome . Primary Identifier  II Chromosome Location . Start  11865431
Chromosome Location . End  11874788 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K12D12.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003789 npp-3 K12D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K12D12.2 K12D12.2 5091   II: 11865688-11865851

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K12D12.2.1 11865431 11874788 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70485   421   II: 11865431-11865851 Caenorhabditis elegans
Exon70486   218   II: 11865907-11866124 Caenorhabditis elegans
Exon70487   140   II: 11866532-11866671 Caenorhabditis elegans
Exon70488   390   II: 11866730-11867119 Caenorhabditis elegans
Exon70489   63   II: 11867183-11867245 Caenorhabditis elegans
Exon70490   90   II: 11868142-11868231 Caenorhabditis elegans
Exon70495   142   II: 11869701-11869842 Caenorhabditis elegans
Exon70496   746   II: 11869904-11870649 Caenorhabditis elegans
Exon70497   305   II: 11870696-11871000 Caenorhabditis elegans
Exon70498   348   II: 11871064-11871411 Caenorhabditis elegans
Exon70499   106   II: 11871847-11871952 Caenorhabditis elegans
Exon70500   1595   II: 11872005-11873599 Caenorhabditis elegans
Exon70501   205   II: 11873754-11873958 Caenorhabditis elegans
Exon70502   92   II: 11874008-11874099 Caenorhabditis elegans
Exon70503   352   II: 11874160-11874511 Caenorhabditis elegans
Exon70504   230   II: 11874559-11874788 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K12D12.2.1 11865431 11874788 -1

1 Sequence

Length
5443

1 Sequence Ontology Term

Identifier Name Description
transcript