WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27D12.2c.1 Sequence Name  T27D12.2c.1
Length (nt)  2922   Chromosome Location  II: 11846859-11856461
Chromosome . Primary Identifier  II Chromosome Location . Start  11846859
Chromosome Location . End  11856461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27D12.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000528 clh-1 T27D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27D12.2c T27D12.2c 2922   II: 11846859-11846974

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27D12.2c.1 11846859 11856461 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70352   116   II: 11846859-11846974 Caenorhabditis elegans
Exon70356   184   II: 11847031-11847214 Caenorhabditis elegans
Exon70363   108   II: 11847278-11847385 Caenorhabditis elegans
Exon70370   63   II: 11847429-11847491 Caenorhabditis elegans
Exon70380   127   II: 11847722-11847848 Caenorhabditis elegans
Exon70384   45   II: 11847982-11848026 Caenorhabditis elegans
Exon70393   237   II: 11848423-11848659 Caenorhabditis elegans
Exon70400   639   II: 11848714-11849352 Caenorhabditis elegans
Exon70407   102   II: 11849863-11849964 Caenorhabditis elegans
Exon70414   217   II: 11850107-11850323 Caenorhabditis elegans
Exon70421   163   II: 11850367-11850529 Caenorhabditis elegans
Exon70428   134   II: 11850636-11850769 Caenorhabditis elegans
Exon70435   132   II: 11850820-11850951 Caenorhabditis elegans
Exon70442   120   II: 11850998-11851117 Caenorhabditis elegans
Exon70449   149   II: 11851163-11851311 Caenorhabditis elegans
Exon70458   57   II: 11854514-11854570 Caenorhabditis elegans
Exon70461   129   II: 11854615-11854743 Caenorhabditis elegans
Exon70464   200   II: 11856262-11856461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27D12.2c.1 11846859 11856461 -1

1 Sequence

Length
2922

1 Sequence Ontology Term

Identifier Name Description
transcript