WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27D12.2f.1 Sequence Name  T27D12.2f.1
Length (nt)  2553   Chromosome Location  II: 11846859-11851673
Chromosome . Primary Identifier  II Chromosome Location . Start  11846859
Chromosome Location . End  11851673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27D12.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000528 clh-1 T27D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27D12.2f T27D12.2f 2553   II: 11846859-11846974

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27D12.2f.1 11846859 11851673 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70350   116   II: 11846859-11846974 Caenorhabditis elegans
Exon70359   184   II: 11847031-11847214 Caenorhabditis elegans
Exon70366   108   II: 11847278-11847385 Caenorhabditis elegans
Exon70373   63   II: 11847429-11847491 Caenorhabditis elegans
Exon70377   115   II: 11847722-11847836 Caenorhabditis elegans
Exon70387   45   II: 11847982-11848026 Caenorhabditis elegans
Exon70396   237   II: 11848423-11848659 Caenorhabditis elegans
Exon70403   639   II: 11848714-11849352 Caenorhabditis elegans
Exon70410   102   II: 11849863-11849964 Caenorhabditis elegans
Exon70417   217   II: 11850107-11850323 Caenorhabditis elegans
Exon70424   163   II: 11850367-11850529 Caenorhabditis elegans
Exon70431   134   II: 11850636-11850769 Caenorhabditis elegans
Exon70438   132   II: 11850820-11850951 Caenorhabditis elegans
Exon70445   120   II: 11850998-11851117 Caenorhabditis elegans
Exon70452   149   II: 11851163-11851311 Caenorhabditis elegans
Exon70454   29   II: 11851645-11851673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27D12.2f.1 11846859 11851673 -1

1 Sequence

Length
2553

1 Sequence Ontology Term

Identifier Name Description
transcript