WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T27D12.2a.1 Sequence Name  T27D12.2a.1
Length (nt)  3074   Chromosome Location  II: 11846507-11854743
Chromosome . Primary Identifier  II Chromosome Location . Start  11846507
Chromosome Location . End  11854743 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27D12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000528 clh-1 T27D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27D12.2a T27D12.2a 2721   II: 11846859-11846974

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T27D12.2a.1 11846507 11854743 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70347   468   II: 11846507-11846974 Caenorhabditis elegans
Exon70354   184   II: 11847031-11847214 Caenorhabditis elegans
Exon70361   108   II: 11847278-11847385 Caenorhabditis elegans
Exon70368   63   II: 11847429-11847491 Caenorhabditis elegans
Exon70379   127   II: 11847722-11847848 Caenorhabditis elegans
Exon70382   45   II: 11847982-11848026 Caenorhabditis elegans
Exon70391   237   II: 11848423-11848659 Caenorhabditis elegans
Exon70398   639   II: 11848714-11849352 Caenorhabditis elegans
Exon70405   102   II: 11849863-11849964 Caenorhabditis elegans
Exon70412   217   II: 11850107-11850323 Caenorhabditis elegans
Exon70419   163   II: 11850367-11850529 Caenorhabditis elegans
Exon70426   134   II: 11850636-11850769 Caenorhabditis elegans
Exon70433   132   II: 11850820-11850951 Caenorhabditis elegans
Exon70440   120   II: 11850998-11851117 Caenorhabditis elegans
Exon70447   149   II: 11851163-11851311 Caenorhabditis elegans
Exon70456   57   II: 11854514-11854570 Caenorhabditis elegans
Exon70460   129   II: 11854615-11854743 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T27D12.2a.1 11846507 11854743 -1

1 Sequence

Length
3074

1 Sequence Ontology Term

Identifier Name Description
transcript