WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43G6.9.1 Sequence Name  F43G6.9.1
Length (nt)  2894   Chromosome Location  II: 11774664-11777943
Chromosome . Primary Identifier  II Chromosome Location . Start  11774664
Chromosome Location . End  11777943 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43G6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009661 patr-1 F43G6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43G6.9 F43G6.9 2502   II: 11775033-11775278

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F43G6.9.1 11774664 11777943 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70237   615   II: 11774664-11775278 Caenorhabditis elegans
Exon70238   334   II: 11775327-11775660 Caenorhabditis elegans
Exon70239   500   II: 11775712-11776211 Caenorhabditis elegans
Exon70240   279   II: 11776259-11776537 Caenorhabditis elegans
Exon70241   585   II: 11776590-11777174 Caenorhabditis elegans
Exon70242   192   II: 11777222-11777413 Caenorhabditis elegans
Exon70243   162   II: 11777457-11777618 Caenorhabditis elegans
Exon70244   143   II: 11777670-11777812 Caenorhabditis elegans
Exon70245   84   II: 11777860-11777943 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F43G6.9.1 11774664 11777943 -1

1 Sequence

Length
2894

1 Sequence Ontology Term

Identifier Name Description
transcript