WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47D12.8.1 Sequence Name  C47D12.8.1
Length (nt)  2899   Chromosome Location  II: 11696171-11705371
Chromosome . Primary Identifier  II Chromosome Location . Start  11696171
Chromosome Location . End  11705371 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47D12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008140 xpf-1 C47D12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47D12.8 C47D12.8 2808   II: 11696171-11696610

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47D12.8.1 11696171 11705371 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70062   440   II: 11696171-11696610 Caenorhabditis elegans
Exon70063   740   II: 11696666-11697405 Caenorhabditis elegans
Exon70065   377   II: 11697920-11698296 Caenorhabditis elegans
Exon70070   90   II: 11700599-11700688 Caenorhabditis elegans
Exon70072   126   II: 11700734-11700859 Caenorhabditis elegans
Exon70075   138   II: 11701500-11701637 Caenorhabditis elegans
Exon70077   150   II: 11701688-11701837 Caenorhabditis elegans
Exon70079   87   II: 11702583-11702669 Caenorhabditis elegans
Exon70081   105   II: 11702720-11702824 Caenorhabditis elegans
Exon70083   216   II: 11703565-11703780 Caenorhabditis elegans
Exon70085   216   II: 11704081-11704296 Caenorhabditis elegans
Exon70088   214   II: 11705158-11705371 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47D12.8.1 11696171 11705371 1

1 Sequence

Length
2899

1 Sequence Ontology Term

Identifier Name Description
transcript