WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47D12.1c.1 Sequence Name  C47D12.1c.1
Length (nt)  12156   Chromosome Location  II: 11661800-11675856
Chromosome . Primary Identifier  II Chromosome Location . Start  11661800
Chromosome Location . End  11675856 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47D12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007028 trr-1 C47D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47D12.1c C47D12.1c 12156   II: 11661800-11661982

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47D12.1c.1 11661800 11675856 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69942   183   II: 11661800-11661982 Caenorhabditis elegans
Exon69945   445   II: 11662033-11662477 Caenorhabditis elegans
Exon69948   1385   II: 11662532-11663916 Caenorhabditis elegans
Exon69951   412   II: 11663972-11664383 Caenorhabditis elegans
Exon69954   734   II: 11664436-11665169 Caenorhabditis elegans
Exon69957   287   II: 11665218-11665504 Caenorhabditis elegans
Exon69960   337   II: 11665558-11665894 Caenorhabditis elegans
Exon69963   215   II: 11666508-11666722 Caenorhabditis elegans
Exon69966   894   II: 11666774-11667667 Caenorhabditis elegans
Exon69967   179   II: 11667709-11667887 Caenorhabditis elegans
Exon69970   137   II: 11667937-11668073 Caenorhabditis elegans
Exon69975   613   II: 11668133-11668745 Caenorhabditis elegans
Exon69978   114   II: 11668795-11668908 Caenorhabditis elegans
Exon69981   816   II: 11669001-11669816 Caenorhabditis elegans
Exon69984   2194   II: 11670084-11672277 Caenorhabditis elegans
Exon69985   367   II: 11672332-11672698 Caenorhabditis elegans
Exon69988   378   II: 11672769-11673146 Caenorhabditis elegans
Exon69993   1119   II: 11673201-11674319 Caenorhabditis elegans
Exon69996   124   II: 11674364-11674487 Caenorhabditis elegans
Exon69999   299   II: 11674533-11674831 Caenorhabditis elegans
Exon70002   786   II: 11674886-11675671 Caenorhabditis elegans
Exon70004   138   II: 11675719-11675856 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47D12.1c.1 11661800 11675856 -1

1 Sequence

Length
12156

1 Sequence Ontology Term

Identifier Name Description
transcript