WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47D12.1a.1 Sequence Name  C47D12.1a.1
Length (nt)  12478   Chromosome Location  II: 11661582-11675927
Chromosome . Primary Identifier  II Chromosome Location . Start  11661582
Chromosome Location . End  11675927 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007028 trr-1 C47D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47D12.1a C47D12.1a 12189   II: 11661800-11661982

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47D12.1a.1 11661582 11675927 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69941   401   II: 11661582-11661982 Caenorhabditis elegans
Exon69943   445   II: 11662033-11662477 Caenorhabditis elegans
Exon69946   1385   II: 11662532-11663916 Caenorhabditis elegans
Exon69949   412   II: 11663972-11664383 Caenorhabditis elegans
Exon69952   734   II: 11664436-11665169 Caenorhabditis elegans
Exon69955   287   II: 11665218-11665504 Caenorhabditis elegans
Exon69958   337   II: 11665558-11665894 Caenorhabditis elegans
Exon69961   215   II: 11666508-11666722 Caenorhabditis elegans
Exon69964   894   II: 11666774-11667667 Caenorhabditis elegans
Exon69968   185   II: 11667709-11667893 Caenorhabditis elegans
Exon69971   146   II: 11667937-11668082 Caenorhabditis elegans
Exon69973   613   II: 11668133-11668745 Caenorhabditis elegans
Exon69976   114   II: 11668795-11668908 Caenorhabditis elegans
Exon69979   816   II: 11669001-11669816 Caenorhabditis elegans
Exon69982   2194   II: 11670084-11672277 Caenorhabditis elegans
Exon69986   376   II: 11672332-11672707 Caenorhabditis elegans
Exon69989   387   II: 11672769-11673155 Caenorhabditis elegans
Exon69991   1119   II: 11673201-11674319 Caenorhabditis elegans
Exon69994   124   II: 11674364-11674487 Caenorhabditis elegans
Exon69997   299   II: 11674533-11674831 Caenorhabditis elegans
Exon70000   786   II: 11674886-11675671 Caenorhabditis elegans
Exon70005   209   II: 11675719-11675927 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47D12.1a.1 11661582 11675927 -1

1 Sequence

Length
12478

1 Sequence Ontology Term

Identifier Name Description
transcript