WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D5.1a.1 Sequence Name  F54D5.1a.1
Length (nt)  1823   Chromosome Location  II: 11574941-11577740
Chromosome . Primary Identifier  II Chromosome Location . Start  11574941
Chromosome Location . End  11577740 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D5.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003960 pcs-1 F54D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D5.1a F54D5.1a 1281   II: 11575001-11575149

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54D5.1a.1 11574941 11577740 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69690   209   II: 11574941-11575149 Caenorhabditis elegans
Exon69692   723   II: 11575702-11576424 Caenorhabditis elegans
Exon69694   86   II: 11576477-11576562 Caenorhabditis elegans
Exon69696   112   II: 11576832-11576943 Caenorhabditis elegans
Exon69699   197   II: 11577002-11577198 Caenorhabditis elegans
Exon69700   496   II: 11577245-11577740 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54D5.1a.1 11574941 11577740 -1

1 Sequence

Length
1823

1 Sequence Ontology Term

Identifier Name Description
transcript