WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54D5.2.1 Sequence Name  F54D5.2.1
Length (nt)  1454   Chromosome Location  II: 11573180-11575000
Chromosome . Primary Identifier  II Chromosome Location . Start  11573180
Chromosome Location . End  11575000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010048 F54D5.2 F54D5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54D5.2 F54D5.2 1281   II: 11573272-11573333

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54D5.2.1 11573180 11575000 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69682   154   II: 11573180-11573333 Caenorhabditis elegans
Exon69683   199   II: 11573383-11573581 Caenorhabditis elegans
Exon69684   239   II: 11573638-11573876 Caenorhabditis elegans
Exon69685   191   II: 11573924-11574114 Caenorhabditis elegans
Exon69686   67   II: 11574174-11574240 Caenorhabditis elegans
Exon69687   100   II: 11574300-11574399 Caenorhabditis elegans
Exon69688   264   II: 11574449-11574712 Caenorhabditis elegans
Exon69689   240   II: 11574761-11575000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54D5.2.1 11573180 11575000 1

1 Sequence

Length
1454

1 Sequence Ontology Term

Identifier Name Description
transcript