WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33B4.3b.1 Sequence Name  C33B4.3b.1
Length (nt)  3819   Chromosome Location  II: 11384466-11390965
Chromosome . Primary Identifier  II Chromosome Location . Start  11384466
Chromosome Location . End  11390965 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33B4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006444 shn-1 C33B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33B4.3b C33B4.3b 2982   II: 11385122-11385154

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C33B4.3b.1 11384466 11390965 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69085   689   II: 11384466-11385154 Caenorhabditis elegans
Exon69091   148   II: 11386069-11386216 Caenorhabditis elegans
Exon69094   842   II: 11386701-11387542 Caenorhabditis elegans
Exon69098   323   II: 11387780-11388102 Caenorhabditis elegans
Exon69102   273   II: 11388610-11388882 Caenorhabditis elegans
Exon69105   342   II: 11388940-11389281 Caenorhabditis elegans
Exon69108   589   II: 11389328-11389916 Caenorhabditis elegans
Exon69111   102   II: 11389987-11390088 Caenorhabditis elegans
Exon69114   270   II: 11390348-11390617 Caenorhabditis elegans
Exon69118   241   II: 11390725-11390965 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C33B4.3b.1 11384466 11390965 -1

1 Sequence

Length
3819

1 Sequence Ontology Term

Identifier Name Description
transcript