WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D8.1j.1 Sequence Name  T06D8.1j.1
Length (nt)  10584   Chromosome Location  II: 11203822-11220238
Chromosome . Primary Identifier  II Chromosome Location . Start  11203822
Chromosome Location . End  11220238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D8.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011522 srap-1 T06D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D8.1j T06D8.1j 10584   II: 11203822-11203948

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T06D8.1j.1 11203822 11220238 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

24 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68454   127   II: 11203822-11203948 Caenorhabditis elegans
Exon68469   201   II: 11206666-11206866 Caenorhabditis elegans
Exon68481   90   II: 11207002-11207091 Caenorhabditis elegans
Exon68493   123   II: 11207472-11207594 Caenorhabditis elegans
Exon68505   72   II: 11207650-11207721 Caenorhabditis elegans
Exon68513   87   II: 11208446-11208532 Caenorhabditis elegans
Exon68525   79   II: 11208730-11208808 Caenorhabditis elegans
Exon68533   173   II: 11208872-11209044 Caenorhabditis elegans
Exon68545   237   II: 11209127-11209363 Caenorhabditis elegans
Exon68557   119   II: 11209462-11209580 Caenorhabditis elegans
Exon68569   142   II: 11209647-11209788 Caenorhabditis elegans
Exon68581   525   II: 11209842-11210366 Caenorhabditis elegans
Exon68593   489   II: 11210415-11210903 Caenorhabditis elegans
Exon68607   1062   II: 11210951-11212012 Caenorhabditis elegans
Exon68617   5741   II: 11212146-11217886 Caenorhabditis elegans
Exon68629   123   II: 11217935-11218057 Caenorhabditis elegans
Exon68641   114   II: 11218100-11218213 Caenorhabditis elegans
Exon68653   103   II: 11218265-11218367 Caenorhabditis elegans
Exon68660   45   II: 11218450-11218494 Caenorhabditis elegans
Exon68666   288   II: 11218627-11218914 Caenorhabditis elegans
Exon68677   84   II: 11219458-11219541 Caenorhabditis elegans
Exon68689   131   II: 11219589-11219719 Caenorhabditis elegans
Exon68701   163   II: 11219762-11219924 Caenorhabditis elegans
Exon68711   266   II: 11219973-11220238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T06D8.1j.1 11203822 11220238 1

1 Sequence

Length
10584

1 Sequence Ontology Term

Identifier Name Description
transcript