WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D8.1a.1 Sequence Name  T06D8.1a.1
Length (nt)  11159   Chromosome Location  II: 11203221-11220642
Chromosome . Primary Identifier  II Chromosome Location . Start  11203221
Chromosome Location . End  11220642 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D8.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011522 srap-1 T06D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D8.1a T06D8.1a 10599   II: 11203822-11203948

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06D8.1a.1 11203221 11220642 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68445   106   II: 11203221-11203326 Caenorhabditis elegans
Exon68446   177   II: 11203772-11203948 Caenorhabditis elegans
Exon68460   201   II: 11206666-11206866 Caenorhabditis elegans
Exon68472   90   II: 11207002-11207091 Caenorhabditis elegans
Exon68484   123   II: 11207472-11207594 Caenorhabditis elegans
Exon68496   72   II: 11207650-11207721 Caenorhabditis elegans
Exon68516   102   II: 11208446-11208547 Caenorhabditis elegans
Exon68520   79   II: 11208730-11208808 Caenorhabditis elegans
Exon68528   173   II: 11208872-11209044 Caenorhabditis elegans
Exon68536   237   II: 11209127-11209363 Caenorhabditis elegans
Exon68548   119   II: 11209462-11209580 Caenorhabditis elegans
Exon68560   142   II: 11209647-11209788 Caenorhabditis elegans
Exon68572   525   II: 11209842-11210366 Caenorhabditis elegans
Exon68584   489   II: 11210415-11210903 Caenorhabditis elegans
Exon68602   1062   II: 11210951-11212012 Caenorhabditis elegans
Exon68608   5741   II: 11212146-11217886 Caenorhabditis elegans
Exon68620   123   II: 11217935-11218057 Caenorhabditis elegans
Exon68632   114   II: 11218100-11218213 Caenorhabditis elegans
Exon68644   103   II: 11218265-11218367 Caenorhabditis elegans
Exon68656   45   II: 11218450-11218494 Caenorhabditis elegans
Exon68662   288   II: 11218627-11218914 Caenorhabditis elegans
Exon68668   84   II: 11219458-11219541 Caenorhabditis elegans
Exon68680   131   II: 11219589-11219719 Caenorhabditis elegans
Exon68692   163   II: 11219762-11219924 Caenorhabditis elegans
Exon68714   670   II: 11219973-11220642 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06D8.1a.1 11203221 11220642 1

1 Sequence

Length
11159

1 Sequence Ontology Term

Identifier Name Description
transcript