WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06D8.1i.1 Sequence Name  T06D8.1i.1
Length (nt)  10407   Chromosome Location  II: 11203221-11220238
Chromosome . Primary Identifier  II Chromosome Location . Start  11203221
Chromosome Location . End  11220238 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06D8.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011522 srap-1 T06D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06D8.1i T06D8.1i 10251   II: 11203822-11203948

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T06D8.1i.1 11203221 11220238 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68444   106   II: 11203221-11203326 Caenorhabditis elegans
Exon68448   177   II: 11203772-11203948 Caenorhabditis elegans
Exon68468   201   II: 11206666-11206866 Caenorhabditis elegans
Exon68480   90   II: 11207002-11207091 Caenorhabditis elegans
Exon68492   123   II: 11207472-11207594 Caenorhabditis elegans
Exon68504   72   II: 11207650-11207721 Caenorhabditis elegans
Exon68512   87   II: 11208446-11208532 Caenorhabditis elegans
Exon68524   79   II: 11208730-11208808 Caenorhabditis elegans
Exon68532   173   II: 11208872-11209044 Caenorhabditis elegans
Exon68544   237   II: 11209127-11209363 Caenorhabditis elegans
Exon68556   119   II: 11209462-11209580 Caenorhabditis elegans
Exon68568   142   II: 11209647-11209788 Caenorhabditis elegans
Exon68580   525   II: 11209842-11210366 Caenorhabditis elegans
Exon68592   489   II: 11210415-11210903 Caenorhabditis elegans
Exon68606   1062   II: 11210951-11212012 Caenorhabditis elegans
Exon68616   5741   II: 11212146-11217886 Caenorhabditis elegans
Exon68628   123   II: 11217935-11218057 Caenorhabditis elegans
Exon68640   114   II: 11218100-11218213 Caenorhabditis elegans
Exon68652   103   II: 11218265-11218367 Caenorhabditis elegans
Exon68676   84   II: 11219458-11219541 Caenorhabditis elegans
Exon68688   131   II: 11219589-11219719 Caenorhabditis elegans
Exon68700   163   II: 11219762-11219924 Caenorhabditis elegans
Exon68710   266   II: 11219973-11220238 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T06D8.1i.1 11203221 11220238 1

1 Sequence

Length
10407

1 Sequence Ontology Term

Identifier Name Description
transcript