WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F8.5a.1 Sequence Name  F40F8.5a.1
Length (nt)  1521   Chromosome Location  II: 11132852-11134928
Chromosome . Primary Identifier  II Chromosome Location . Start  11132852
Chromosome Location . End  11134928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F8.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009578 F40F8.5 F40F8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F8.5a F40F8.5a 1347   II: 11133025-11133151

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40F8.5a.1 11132852 11134928 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68256   300   II: 11132852-11133151 Caenorhabditis elegans
Exon68266   103   II: 11133203-11133305 Caenorhabditis elegans
Exon68276   123   II: 11133353-11133475 Caenorhabditis elegans
Exon68286   132   II: 11133525-11133656 Caenorhabditis elegans
Exon68292   135   II: 11133703-11133837 Caenorhabditis elegans
Exon68296   132   II: 11133981-11134112 Caenorhabditis elegans
Exon68300   66   II: 11134224-11134289 Caenorhabditis elegans
Exon68307   258   II: 11134337-11134594 Caenorhabditis elegans
Exon68326   272   II: 11134657-11134928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40F8.5a.1 11132852 11134928 -1

1 Sequence

Length
1521

1 Sequence Ontology Term

Identifier Name Description
transcript