WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1h.1 Sequence Name  C09D8.1h.1
Length (nt)  3252   Chromosome Location  II: 11007061-11011782
Chromosome . Primary Identifier  II Chromosome Location . Start  11007061
Chromosome Location . End  11011782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1h C09D8.1h 3252   II: 11007061-11007192

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1h.1 11007061 11011782 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67797   132   II: 11007061-11007192 Caenorhabditis elegans
Exon67805   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67819   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67833   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67847   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67861   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67875   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67884   111   II: 11011672-11011782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1h.1 11007061 11011782 1

1 Sequence

Length
3252

1 Sequence Ontology Term

Identifier Name Description
transcript