WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1g.1 Sequence Name  C09D8.1g.1
Length (nt)  4764   Chromosome Location  II: 11005699-11012244
Chromosome . Primary Identifier  II Chromosome Location . Start  11005699
Chromosome Location . End  11012244 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1g C09D8.1g 3744   II: 11006257-11006617

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1g.1 11005699 11012244 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67770   919   II: 11005699-11006617 Caenorhabditis elegans
Exon67777   86   II: 11006751-11006836 Caenorhabditis elegans
Exon67790   177   II: 11007016-11007192 Caenorhabditis elegans
Exon67804   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67818   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67832   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67846   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67860   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67874   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67893   573   II: 11011672-11012244 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1g.1 11005699 11012244 1

1 Sequence

Length
4764

1 Sequence Ontology Term

Identifier Name Description
transcript