WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1c.1 Sequence Name  C09D8.1c.1
Length (nt)  4114   Chromosome Location  II: 11002980-11012242
Chromosome . Primary Identifier  II Chromosome Location . Start  11002980
Chromosome Location . End  11012242 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1c C09D8.1c 3651   II: 11002983-11003250

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1c.1 11002980 11012242 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67769   271   II: 11002980-11003250 Caenorhabditis elegans
Exon67773   86   II: 11006751-11006836 Caenorhabditis elegans
Exon67786   177   II: 11007016-11007192 Caenorhabditis elegans
Exon67800   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67814   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67828   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67842   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67856   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67870   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67891   571   II: 11011672-11012242 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1c.1 11002980 11012242 1

1 Sequence

Length
4114

1 Sequence Ontology Term

Identifier Name Description
transcript