WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1b.1 Sequence Name  C09D8.1b.1
Length (nt)  4959   Chromosome Location  II: 10993507-11012247
Chromosome . Primary Identifier  II Chromosome Location . Start  10993507
Chromosome Location . End  11012247 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1b C09D8.1b 4404   II: 10993597-10993702

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09D8.1b.1 10993507 11012247 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67699   196   II: 10993507-10993702 Caenorhabditis elegans
Exon67702   50   II: 10993895-10993944 Caenorhabditis elegans
Exon67713   265   II: 10994145-10994409 Caenorhabditis elegans
Exon67724   213   II: 10995024-10995236 Caenorhabditis elegans
Exon67735   143   II: 10995310-10995452 Caenorhabditis elegans
Exon67746   111   II: 10996164-10996274 Caenorhabditis elegans
Exon67758   133   II: 10998998-10999130 Caenorhabditis elegans
Exon67772   86   II: 11006751-11006836 Caenorhabditis elegans
Exon67785   177   II: 11007016-11007192 Caenorhabditis elegans
Exon67799   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67813   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67827   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67841   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67855   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67869   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67895   576   II: 11011672-11012247 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09D8.1b.1 10993507 11012247 1

1 Sequence

Length
4959

1 Sequence Ontology Term

Identifier Name Description
transcript