WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09D8.1d.1 Sequence Name  C09D8.1d.1
Length (nt)  6030   Chromosome Location  II: 10983070-11011782
Chromosome . Primary Identifier  II Chromosome Location . Start  10983070
Chromosome Location . End  11011782 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09D8.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004215 ptp-3 C09D8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09D8.1d C09D8.1d 6030   II: 10983070-10983217

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1d.1 10983070 11011782 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67594   148   II: 10983070-10983217 Caenorhabditis elegans
Exon67597   135   II: 10983267-10983401 Caenorhabditis elegans
Exon67607   141   II: 10983794-10983934 Caenorhabditis elegans
Exon67617   124   II: 10983998-10984121 Caenorhabditis elegans
Exon67626   72   II: 10984202-10984273 Caenorhabditis elegans
Exon67632   85   II: 10984385-10984469 Caenorhabditis elegans
Exon67642   246   II: 10984517-10984762 Caenorhabditis elegans
Exon67652   142   II: 10985022-10985163 Caenorhabditis elegans
Exon67662   208   II: 10985213-10985420 Caenorhabditis elegans
Exon67672   71   II: 10985485-10985555 Caenorhabditis elegans
Exon67682   360   II: 10985677-10986036 Caenorhabditis elegans
Exon67703   50   II: 10993895-10993944 Caenorhabditis elegans
Exon67714   265   II: 10994145-10994409 Caenorhabditis elegans
Exon67725   213   II: 10995024-10995236 Caenorhabditis elegans
Exon67736   143   II: 10995310-10995452 Caenorhabditis elegans
Exon67747   111   II: 10996164-10996274 Caenorhabditis elegans
Exon67759   133   II: 10998998-10999130 Caenorhabditis elegans
Exon67774   86   II: 11006751-11006836 Caenorhabditis elegans
Exon67787   177   II: 11007016-11007192 Caenorhabditis elegans
Exon67801   516   II: 11007310-11007825 Caenorhabditis elegans
Exon67815   276   II: 11007889-11008164 Caenorhabditis elegans
Exon67829   99   II: 11009181-11009279 Caenorhabditis elegans
Exon67843   1619   II: 11009368-11010986 Caenorhabditis elegans
Exon67857   253   II: 11011040-11011292 Caenorhabditis elegans
Exon67871   246   II: 11011373-11011618 Caenorhabditis elegans
Exon67882   111   II: 11011672-11011782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09D8.1d.1 10983070 11011782 1

1 Sequence

Length
6030

1 Sequence Ontology Term

Identifier Name Description
transcript